Introduction to the JABS downstream analysis

  1. Importing necessary libraries

We are just going to import basic python libraries to help us analyze predicted behavior

[7]:

# auto reload
%load_ext autoreload
%autoreload 2

[8]:

from stuff import *
from ipywidgets import FloatSlider, interactive, fixed

  1. Visualizing the Ethogram for a sample prediction

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# Reading the sample file
df = load_file('data/sample_file.h5')
int_plot = interactive(draw_ethogram, df=fixed(df['Class'].values.astype(int)),i=FloatSlider(min=1, max=100, step=1), save_fig=False);
int_plot

  1. Frame counting statistics